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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs10935120 1 rs6800862 chr3:134228628 CEP63 chr3:134204575-134293852:+ 0.41 6 3.54E-8 Height
THYM cis rs9815354 1 rs6801343 chr3:41767234 ULK4 chr3:41288091-42003660:- 1.01 11.12 6.86E-19 Diastolic blood pressure
THYM cis rs10935120 1 rs6801596 chr3:134252114 ANAPC13 chr3:134196547-134204865:- 0.56 7.61 1.94E-11 Height
THYM cis rs10935120 1 rs6801596 chr3:134252114 CEP63 chr3:134204575-134293852:+ 0.41 6 3.54E-8 Height
THYM cis rs9815354 1 rs6802340 chr3:41894034 ULK4 chr3:41288091-42003660:- 1.02 11.47 1.22E-19 Diastolic blood pressure
THYM cis rs10935120 1 rs6802654 chr3:134217072 ANAPC13 chr3:134196547-134204865:- 0.58 8.01 2.88E-12 Height
THYM cis rs10935120 1 rs6802654 chr3:134217072 CEP63 chr3:134204575-134293852:+ 0.41 6.04 2.93E-8 Height
THYM cis rs9815354 1 rs6803560 chr3:41824480 ULK4 chr3:41288091-42003660:- 1.02 11.1 7.68E-19 Diastolic blood pressure
THYM cis rs9815354 1 rs6803652 chr3:41824556 ULK4 chr3:41288091-42003660:- 1.02 11.1 7.68E-19 Diastolic blood pressure
THYM cis rs1401999 1 rs6804242 chr3:183659463 ABCC5 chr3:183637726-183735727:- 0.48 4.22 5.61E-5 Anterior chamber depth
THYM cis rs10935120 1 rs6804770 chr3:134230234 ANAPC13 chr3:134196547-134204865:- 0.58 8.01 2.88E-12 Height
THYM cis rs10935120 1 rs6804770 chr3:134230234 CEP63 chr3:134204575-134293852:+ 0.41 6.04 2.93E-8 Height
THYM cis rs9876781 1 rs6804774 chr3:48430617 TREX1 chr3:48501186-48509043:+ -0.28 -4.25 5.0E-5 Longevity
THYM cis rs9815354 1 rs6805880 chr3:41865397 ULK4 chr3:41288091-42003660:- 1 10.81 3.16E-18 Diastolic blood pressure
THYM cis rs1401999 1 rs6805913 chr3:183662924 ABCC5 chr3:183637726-183735727:- 0.48 4.22 5.61E-5 Anterior chamber depth